STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARL13BADP ribosylation factor like GTPase 13B. (358 aa)    
Predicted Functional Partners:
PDE6D
Phosphodiesterase 6D.
     
 0.851
ENSCAPP00000017221
annotation not available
   
  0.838
ARL3
ADP ribosylation factor like GTPase 3.
   
0.833
INPP5E
Inositol polyphosphate-5-phosphatase E.
     
 0.827
IFT88
Intraflagellar transport 88.
    
 0.821
COG6
Component of oligomeric golgi complex 6.
    
 0.806
CPLANE2
Ciliogenesis and planar polarity effector 2.
    
 0.788
ARL1
ADP ribosylation factor like GTPase 1.
    
0.760
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.760
IFT22
Intraflagellar transport 22.
    
 
 0.746
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.