STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HMGCLL13-hydroxymethyl-3-methylglutaryl-CoA lyase like 1. (276 aa)    
Predicted Functional Partners:
OXCT1
3-oxoacid CoA-transferase 1.
  
 
 0.941
ECHDC2
enoyl-CoA hydratase domain containing 2.
  
 
 0.931
ENSCAPP00000003426
annotation not available
  
 
 0.918
HADHB
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
  
 
 0.917
ACAT2
acetyl-CoA acetyltransferase 2.
  
 
 0.913
ACAT1
acetyl-CoA acetyltransferase 1.
  
 
 0.913
HMGCS2
3-hydroxy-3-methylglutaryl-CoA synthase 2.
    
 0.912
BDH1
3-hydroxybutyrate dehydrogenase 1.
     
 0.905
CS
Citrate synthase.
  
 
 0.905
ACAA2
acetyl-CoA acyltransferase 2.
  
 
 0.903
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.