STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC17Zinc finger CCHC-type containing 17. (217 aa)    
Predicted Functional Partners:
BYSL
Bystin like.
   
 0.884
CDC5L
Cell division cycle 5 like.
   
 0.884
WDR36
WD repeat domain 36.
   
 0.881
SLU7
SLU7 homolog, splicing factor.
   
 0.875
XAB2
XPA binding protein 2.
   
 0.866
NOL6
Nucleolar protein 6.
   
  0.861
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
   
 0.861
NOP14
NOP14 nucleolar protein.
   
 0.860
SYF2
SYF2 pre-mRNA splicing factor.
    
 0.860
DDX49
DEAD-box helicase 49.
  
 0.860
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.