Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMOD1Tropomodulin 1. (322 aa)    
Predicted Functional Partners:
GSN
Gelsolin.
    
 
 0.971
SCIN
Scinderin.
    
 
 0.970
GPS1
G protein pathway suppressor 1.
    
  0.961
COPS3
COP9 signalosome subunit 3.
    
  0.960
ENSCAPP00000011226
annotation not available
    
 
 0.959
ENSCAPP00000000494
annotation not available
    
   0.957
FLII
FLII actin remodeling protein.
    
 
 0.957
COPS7B
COP9 signalosome subunit 7B.
    
  0.956
COPS7A
COP9 signalosome subunit 7A.
    
  0.950
PLCG1
Phospholipase C gamma 1.
    
 0.947
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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