Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
UBN2Ubinuclein 2. (1151 aa)    
Predicted Functional Partners:
HIRA
Histone cell cycle regulator.
    
 
 0.966
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.963
ASF1B
Anti-silencing function 1B histone chaperone.
   
 
 0.959
TEAD2
TEA domain transcription factor 2.
    
   0.831
ENSCAPP00000012844
annotation not available
    
 
 0.697
LANCL1
LanC like 1.
    
   0.687
ENSCAPP00000004504
annotation not available
   
    0.661
HINT2
Histidine triad nucleotide binding protein 2.
    
 0.654
TAF1C
TATA-box binding protein associated factor, RNA polymerase I subunit C.
    
 0.654
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.645
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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