STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBN2Ubinuclein 2. (1151 aa)    
Predicted Functional Partners:
HINT2
Histidine triad nucleotide binding protein 2.
    
 0.728
TAF1C
TATA-box binding protein associated factor, RNA polymerase I subunit C.
    
 0.728
TBP
TATA-box binding protein.
    
 0.720
ENSCAPP00000015721
annotation not available
    
 0.720
TBPL1
TATA-box binding protein like 1.
    
 0.720
HIRA
Histone cell cycle regulator.
    
 
 0.680
ENSCAPP00000004504
annotation not available
   
    0.669
RRN3
RRN3 homolog, RNA polymerase I transcription factor.
    
 0.653
ASF1A
Anti-silencing function 1A histone chaperone.
   
 
 0.620
ENSCAPP00000002338
annotation not available
    
 0.619
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.