STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATAD1ATPase family AAA domain containing 1. (232 aa)    
Predicted Functional Partners:
ENSCAPP00000010317
annotation not available
    
 0.874
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.857
PEX13
Peroxisomal biogenesis factor 13.
    
 0.832
PEX12
Peroxisomal biogenesis factor 12.
    
 0.830
PEX14
Peroxisomal biogenesis factor 14.
    
 0.821
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
   
 0.817
ENSCAPP00000006743
annotation not available
   
 0.780
PEX3
Peroxisomal biogenesis factor 3.
    
 0.778
ENSCAPP00000006113
annotation not available
    
 0.770
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 0.765
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.