Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATAD1ATPase family AAA domain containing 1. (232 aa)    
Predicted Functional Partners:
GET3
Guided entry of tail-anchored proteins factor 3, ATPase.
  
 
 0.934
ENSCAPP00000010317
annotation not available
    
 0.909
PEX12
Peroxisomal biogenesis factor 12.
    
 0.869
GDAP1
Ganglioside induced differentiation associated protein 1.
     
 0.839
PEX13
Peroxisomal biogenesis factor 13.
   
 0.809
PEX16
Peroxisomal biogenesis factor 16.
     
 0.797
GET1
Guided entry of tail-anchored proteins factor 1.
    
 
 0.791
ACBD5
acyl-CoA binding domain containing 5.
     
 0.773
PEX14
Peroxisomal biogenesis factor 14.
    
 0.760
ABCD3
ATP binding cassette subfamily D member 3.
     
 0.756
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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