Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A2MAlpha-2-macroglobulin. (1303 aa)    
Predicted Functional Partners:
CBX2
Chromobox 2.
    
 0.949
CBX7
Chromobox 7.
    
 0.944
CBX4
Chromobox 4.
    
 0.942
SCMH1
Scm polycomb group protein homolog 1.
    
 0.916
PLAU
Plasminogen activator, urokinase.
    
 0.880
ENSCAPP00000001276
annotation not available
    
 0.864
PCGF2
Polycomb group ring finger 2.
    
 0.864
PCGF1
Polycomb group ring finger 1.
    
 0.831
PCGF5
Polycomb group ring finger 5.
    
 0.830
PCGF3
Polycomb group ring finger 3.
    
 0.829
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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