Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASF1BAnti-silencing function 1B histone chaperone. (188 aa)    
Predicted Functional Partners:
UBN1
Ubinuclein 1.
    
 0.995
CABIN1
Calcineurin binding protein 1.
    
 0.992
HIRA
Histone cell cycle regulator.
    
 0.991
CDAN1
Codanin 1.
    
 
 0.985
TLK1
Tousled like kinase 1.
    
 
 0.985
TLK2
Tousled like kinase 2.
    
 
 0.984
CHAF1A
Chromatin assembly factor 1 subunit A.
   
 
 0.980
CHAF1B
Chromatin assembly factor 1 subunit B.
   
 
 0.979
HAT1
Histone acetyltransferase 1.
   
 
 0.978
IPO4
Importin 4.
   
 
 0.977
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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