STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMTNL2Smoothelin like 2. (324 aa)    
Predicted Functional Partners:
SFN
Stratifin.
    
   0.957
CDK2
Cyclin dependent kinase 2.
    
   0.856
ENSCAPP00000009903
annotation not available
    
   0.856
ENSCAPP00000017737
annotation not available
    
   0.856
CCNA2
Cyclin A2.
    
   0.851
ABLIM2
Actin binding LIM protein family member 2.
      
 0.795
YWHAQ
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta.
    
   0.790
ENSCAPP00000006187
annotation not available
    
   0.790
CCNA1
Cyclin A1.
    
   0.781
RASL10B
RAS like family 10 member B.
     
 0.627
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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