Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CXXC5CXXC finger protein 5. (317 aa)    
Predicted Functional Partners:
DVL1
Dishevelled segment polarity protein 1.
    
 0.862
DVL2
Dishevelled segment polarity protein 2.
    
 0.764
DVL3
Dishevelled segment polarity protein 3.
    
 0.764
TET2
Tet methylcytosine dioxygenase 2.
    
 0.705
TET1
Tet methylcytosine dioxygenase 1.
    
 0.687
ENSCAPP00000009688
annotation not available
    
 0.687
THRB
Thyroid hormone receptor beta.
     
 0.622
BRINP2
BMP/retinoic acid inducible neural specific 2.
      
 0.570
SLC41A2
Solute carrier family 41 member 2.
      
 0.569
ENSCAPP00000007139
annotation not available
      
 0.547
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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