STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1312 aa)    
Predicted Functional Partners:
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
    
 0.996
ENSCAPP00000005654
annotation not available
   
 0.985
POLR2G
RNA polymerase II subunit G.
    
  0.985
ENSCAPP00000005711
annotation not available
    
  0.969
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
   
 0.962
POLR2B
RNA polymerase II subunit B.
   
 0.928
FBF1
Fas binding factor 1.
    
 0.924
GTF2B
General transcription factor IIB.
    
  0.918
GTF2A1
General transcription factor IIA subunit 1.
   
 
  0.914
GTF2H3
General transcription factor IIH subunit 3.
     
  0.913
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.