STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPRD2Regulation of nuclear pre-mRNA domain containing 2. (1312 aa)    
Predicted Functional Partners:
POLR2B
RNA polymerase II subunit B.
   
 0.948
ENSCAPP00000005654
annotation not available
   
 0.930
POLR2G
RNA polymerase II subunit G.
    
  0.914
XRN2
5'-3' exoribonuclease 2.
   
 
 0.886
ENSCAPP00000001157
annotation not available
    
 0.857
POLR2C
RNA polymerase II subunit C.
    
 0.848
RPRD1A
Regulation of nuclear pre-mRNA domain containing 1A.
    
 0.845
POLR2I
RNA polymerase II subunit I.
    
 0.844
ENSCAPP00000006137
annotation not available
    
 
 0.828
ENSCAPP00000011458
annotation not available
    
  0.828
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.