CELF1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CELF1

CUGBP Elav-like family member 1. (421 aa)

Predicted Functional Partners:

ENSCAPP00000006614

0.954

RALY

0.937

ENSCAPP00000008970

0.754

ENSCAPP00000012160

0.754

SSX2IP

0.688

MBNL3

0.654

RBM3

0.609

EPHB2

0.593

PTBP1

0.590

TARDBP

0.588

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CELF1	ENSCAPP00000006614	ENSCAPP00000004220	ENSCAPP00000006614	CUGBP Elav-like family member 1.	annotation not available	0.954
CELF1	ENSCAPP00000008970	ENSCAPP00000004220	ENSCAPP00000008970	CUGBP Elav-like family member 1.	annotation not available	0.754
CELF1	ENSCAPP00000012160	ENSCAPP00000004220	ENSCAPP00000012160	CUGBP Elav-like family member 1.	annotation not available	0.754
CELF1	EPHB2	ENSCAPP00000004220	ENSCAPP00000008118	CUGBP Elav-like family member 1.	EPH receptor B2.	0.593
CELF1	MBNL3	ENSCAPP00000004220	ENSCAPP00000009808	CUGBP Elav-like family member 1.	Muscleblind like splicing regulator 3.	0.654
CELF1	PTBP1	ENSCAPP00000004220	ENSCAPP00000008442	CUGBP Elav-like family member 1.	Polypyrimidine tract binding protein 1.	0.590
CELF1	RALY	ENSCAPP00000004220	ENSCAPP00000005898	CUGBP Elav-like family member 1.	RALY heterogeneous nuclear ribonucleoprotein.	0.937
CELF1	RBM3	ENSCAPP00000004220	ENSCAPP00000003071	CUGBP Elav-like family member 1.	RNA binding motif protein 3.	0.609
CELF1	SSX2IP	ENSCAPP00000004220	ENSCAPP00000007543	CUGBP Elav-like family member 1.	SSX family member 2 interacting protein.	0.688
CELF1	TARDBP	ENSCAPP00000004220	ENSCAPP00000014956	CUGBP Elav-like family member 1.	TAR DNA binding protein.	0.588
ENSCAPP00000006614	CELF1	ENSCAPP00000006614	ENSCAPP00000004220	annotation not available	CUGBP Elav-like family member 1.	0.954
ENSCAPP00000006614	ENSCAPP00000008970	ENSCAPP00000006614	ENSCAPP00000008970	annotation not available	annotation not available	0.830
ENSCAPP00000006614	ENSCAPP00000012160	ENSCAPP00000006614	ENSCAPP00000012160	annotation not available	annotation not available	0.831
ENSCAPP00000006614	PTBP1	ENSCAPP00000006614	ENSCAPP00000008442	annotation not available	Polypyrimidine tract binding protein 1.	0.882
ENSCAPP00000006614	RALY	ENSCAPP00000006614	ENSCAPP00000005898	annotation not available	RALY heterogeneous nuclear ribonucleoprotein.	0.932
ENSCAPP00000006614	RBM3	ENSCAPP00000006614	ENSCAPP00000003071	annotation not available	RNA binding motif protein 3.	0.830
ENSCAPP00000006614	TARDBP	ENSCAPP00000006614	ENSCAPP00000014956	annotation not available	TAR DNA binding protein.	0.857
ENSCAPP00000008970	CELF1	ENSCAPP00000008970	ENSCAPP00000004220	annotation not available	CUGBP Elav-like family member 1.	0.754
ENSCAPP00000008970	ENSCAPP00000006614	ENSCAPP00000008970	ENSCAPP00000006614	annotation not available	annotation not available	0.830
ENSCAPP00000008970	ENSCAPP00000012160	ENSCAPP00000008970	ENSCAPP00000012160	annotation not available	annotation not available	0.896