CELF1 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

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gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

CELF1

CUGBP Elav-like family member 1. (421 aa)

Predicted Functional Partners:

ENSCAPP00000006614

0.978

RALY

0.961

SSX2IP

0.912

NOTCH1

0.911

ENSCAPP00000008970

0.828

ENSCAPP00000012160

0.828

CELF2

0.784

MBNL3

0.765

CLCN1

0.687

ABLIM1

0.685

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABLIM1	CELF1	ENSCAPP00000000412	ENSCAPP00000004220	Actin binding LIM protein 1.	CUGBP Elav-like family member 1.	0.685
ABLIM1	CELF2	ENSCAPP00000000412	ENSCAPP00000013517	Actin binding LIM protein 1.	CUGBP Elav-like family member 2.	0.667
ABLIM1	CLCN1	ENSCAPP00000000412	ENSCAPP00000014326	Actin binding LIM protein 1.	Chloride voltage-gated channel 1.	0.652
CELF1	ABLIM1	ENSCAPP00000004220	ENSCAPP00000000412	CUGBP Elav-like family member 1.	Actin binding LIM protein 1.	0.685
CELF1	CELF2	ENSCAPP00000004220	ENSCAPP00000013517	CUGBP Elav-like family member 1.	CUGBP Elav-like family member 2.	0.784
CELF1	CLCN1	ENSCAPP00000004220	ENSCAPP00000014326	CUGBP Elav-like family member 1.	Chloride voltage-gated channel 1.	0.687
CELF1	ENSCAPP00000006614	ENSCAPP00000004220	ENSCAPP00000006614	CUGBP Elav-like family member 1.	annotation not available	0.978
CELF1	ENSCAPP00000008970	ENSCAPP00000004220	ENSCAPP00000008970	CUGBP Elav-like family member 1.	annotation not available	0.828
CELF1	ENSCAPP00000012160	ENSCAPP00000004220	ENSCAPP00000012160	CUGBP Elav-like family member 1.	annotation not available	0.828
CELF1	MBNL3	ENSCAPP00000004220	ENSCAPP00000009808	CUGBP Elav-like family member 1.	Muscleblind like splicing regulator 3.	0.765
CELF1	NOTCH1	ENSCAPP00000004220	ENSCAPP00000010817	CUGBP Elav-like family member 1.	Notch receptor 1.	0.911
CELF1	RALY	ENSCAPP00000004220	ENSCAPP00000005898	CUGBP Elav-like family member 1.	RALY heterogeneous nuclear ribonucleoprotein.	0.961
CELF1	SSX2IP	ENSCAPP00000004220	ENSCAPP00000007543	CUGBP Elav-like family member 1.	SSX family member 2 interacting protein.	0.912
CELF2	ABLIM1	ENSCAPP00000013517	ENSCAPP00000000412	CUGBP Elav-like family member 2.	Actin binding LIM protein 1.	0.667
CELF2	CELF1	ENSCAPP00000013517	ENSCAPP00000004220	CUGBP Elav-like family member 2.	CUGBP Elav-like family member 1.	0.784
CELF2	CLCN1	ENSCAPP00000013517	ENSCAPP00000014326	CUGBP Elav-like family member 2.	Chloride voltage-gated channel 1.	0.438
CELF2	ENSCAPP00000006614	ENSCAPP00000013517	ENSCAPP00000006614	CUGBP Elav-like family member 2.	annotation not available	0.891
CELF2	ENSCAPP00000008970	ENSCAPP00000013517	ENSCAPP00000008970	CUGBP Elav-like family member 2.	annotation not available	0.575
CELF2	ENSCAPP00000012160	ENSCAPP00000013517	ENSCAPP00000012160	CUGBP Elav-like family member 2.	annotation not available	0.575
CELF2	MBNL3	ENSCAPP00000013517	ENSCAPP00000009808	CUGBP Elav-like family member 2.	Muscleblind like splicing regulator 3.	0.573