close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POLDIP3DNA polymerase delta interacting protein 3. (404 aa)    
Predicted Functional Partners:
RANBP2
RAN binding protein 2.
   
 0.988
DDX39B
DExD-box helicase 39B.
   
 0.969
EIF4A3
Eukaryotic translation initiation factor 4A3.
   
 0.964
DDX39A
DExD-box helicase 39A.
   
 0.953
RBM8A
RNA binding motif protein 8A.
   
 0.943
ENSCAPP00000016641
annotation not available
   
 0.941
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.940
THOC1
THO complex 1.
    
 0.939
ENSCAPP00000009699
annotation not available
   
 0.938
ENSCAPP00000008334
annotation not available
   
 0.936
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.