STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C1QTNF12C1q and TNF related 12. (300 aa)    
Predicted Functional Partners:
ENSCAPP00000002614
annotation not available
   
 
 0.987
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 
 0.987
UBE2G2
Ubiquitin conjugating enzyme E2 G2.
    
 0.892
ATG7
Autophagy related 7.
    
 0.838
UBE2G1
Ubiquitin conjugating enzyme E2 G1.
    
 0.801
ENSCAPP00000004508
annotation not available
   
 0.786
ENSCAPP00000008157
annotation not available
    
 0.783
UBA1
Ubiquitin like modifier activating enzyme 1.
    
 0.779
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
    
 0.779
UBA6
Ubiquitin like modifier activating enzyme 6.
    
 0.779
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.