Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004229annotation not available (54 aa)    
Predicted Functional Partners:
MYD88
MYD88 innate immune signal transduction adaptor.
   
 0.999
IRAK1
Interleukin 1 receptor associated kinase 1.
    
 0.998
TIRAP
TIR domain containing adaptor protein.
    
 0.996
TRAF6
TNF receptor associated factor 6.
   
 0.996
IL1R1
Interleukin 1 receptor type 1.
    
 0.994
ENSCAPP00000013134
annotation not available
   
 0.994
PELI1
Pellino E3 ubiquitin protein ligase 1.
    
 0.990
ENSCAPP00000000032
annotation not available
    
 0.972
TOLLIP
Toll interacting protein.
    
 0.970
IL1RL2
Interleukin 1 receptor like 2.
    
 0.969
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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