Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSAT1Phosphoserine aminotransferase 1. (360 aa)    
Predicted Functional Partners:
PSPH
Phosphoserine phosphatase.
  
 
 0.988
ENSCAPP00000007369
annotation not available
  
 0.952
ENSCAPP00000015419
annotation not available
  
 0.952
FRMD3
FERM domain containing 3.
      
 0.949
THNSL2
Threonine synthase like 2.
  
 0.910
ENSCAPP00000018242
annotation not available
    
 0.909
TLE1
TLE family member 1, transcriptional corepressor.
      
 0.861
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
  
  
 0.851
UBE2O
Ubiquitin conjugating enzyme E2 O.
    
   0.839
GRHPR
Glyoxylate and hydroxypyruvate reductase.
   
 
 0.817
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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