STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PNNPinin, desmosome associated protein. (641 aa)    
Predicted Functional Partners:
RNPS1
RNA binding protein with serine rich domain 1.
   
 0.999
SAP18
Sin3A associated protein 18.
    
 0.998
EIF4A3
Eukaryotic translation initiation factor 4A3.
    
 0.997
ENSCAPP00000004582
annotation not available
   
 0.997
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 0.996
ENSCAPP00000007564
annotation not available
   
 0.996
PRPF4B
pre-mRNA processing factor 4B.
   
 0.994
CASC3
CASC3 exon junction complex subunit.
    
 0.991
ENSCAPP00000008062
annotation not available
    
  0.989
PPIG
Peptidylprolyl isomerase G.
   
 0.984
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.