STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCNJCyclin J. (263 aa)    
Predicted Functional Partners:
NAGA
alpha-N-acetylgalactosaminidase.
      
 0.928
ENSCAPP00000017666
annotation not available
    
 0.850
NKRF
NFKB repressing factor.
    
 0.846
GRAMD4
GRAM domain containing 4.
     
 0.827
ENSCAPP00000000218
annotation not available
      
 0.811
ENSCAPP00000001941
annotation not available
      
 0.811
CCNG2
Cyclin G2.
   
 0.802
CDC6
Cell division cycle 6.
   
 0.792
FZR1
Fizzy and cell division cycle 20 related 1.
   
 0.763
CDT1
Chromatin licensing and DNA replication factor 1.
   
 0.763
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.