STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMOD4Tropomodulin 4. (345 aa)    
Predicted Functional Partners:
GPS1
G protein pathway suppressor 1.
    
  0.867
COPS3
COP9 signalosome subunit 3.
    
  0.864
HSPA5
Heat shock protein family A (Hsp70) member 5.
    
  0.846
EPB41L2
Erythrocyte membrane protein band 4.1 like 2.
    
 0.842
COPS7B
COP9 signalosome subunit 7B.
    
  0.840
AMOTL1
Angiomotin like 1.
    
  0.838
DCAF1
DDB1 and CUL4 associated factor 1.
    
  0.838
COPS7A
COP9 signalosome subunit 7A.
    
  0.835
ATP5F1A
ATP synthase F1 subunit alpha.
    
  0.834
COPS6
COP9 signalosome subunit 6.
    
  0.816
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.