STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMOD4Tropomodulin 4. (345 aa)    
Predicted Functional Partners:
SCIN
Scinderin.
    
 
 0.925
TMOD1
Tropomodulin 1.
     
  0.862
TMOD3
Tropomodulin 3.
     
  0.856
TMOD2
Tropomodulin 2.
     
  0.852
GPS1
G protein pathway suppressor 1.
    
  0.834
FLII
FLII actin remodeling protein.
    
 
 0.830
COPS3
COP9 signalosome subunit 3.
    
  0.827
HSPA5
Heat shock protein family A (Hsp70) member 5.
    
  0.818
EPB41L2
Erythrocyte membrane protein band 4.1 like 2.
    
 0.816
ENSCAPP00000002506
annotation not available
    
 0.815
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.