Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004243annotation not available (425 aa)    
Predicted Functional Partners:
ENSCAPP00000005006
annotation not available
   
 0.966
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.951
DDX58
DExD/H-box helicase 58.
   
 0.950
ENSCAPP00000013767
annotation not available
   
 0.950
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.937
GAK
Cyclin G associated kinase.
    
 0.904
IFIH1
Interferon induced with helicase C domain 1.
   
 0.897
OASL
2'-5'-oligoadenylate synthetase like.
   
 
  0.896
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.894
IFI35
Interferon induced protein 35.
   
 0.894
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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