Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTPDC1Protein tyrosine phosphatase domain containing 1. (751 aa)    
Predicted Functional Partners:
PPP2R2D
Protein phosphatase 2 regulatory subunit Bdelta.
    
  0.961
PPP2R2A
Protein phosphatase 2 regulatory subunit Balpha.
    
  0.961
ENSCAPP00000000496
annotation not available
      
 0.874
PPP2R2B
Protein phosphatase 2 regulatory subunit Bbeta.
    
  0.857
PPP2R2C
Protein phosphatase 2 regulatory subunit Bgamma.
    
  0.822
ENSCAPP00000001134
annotation not available
      
 0.768
KIF20A
Kinesin family member 20A.
      
 0.687
IPPK
Inositol-pentakisphosphate 2-kinase.
      
 0.686
GPER1
G protein-coupled estrogen receptor 1.
      
 0.667
RYK
Receptor like tyrosine kinase.
    
 0.643
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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