Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
WARS1tryptophanyl-tRNA synthetase 1. (472 aa)    
Predicted Functional Partners:
WARS2
Tryptophanyl tRNA synthetase 2, mitochondrial.
     
 0.956
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.940
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.907
SARS1
seryl-tRNA synthetase 1.
  
 
 0.901
MARS1
methionyl-tRNA synthetase 1.
  
 
 0.804
ENSCAPP00000012392
annotation not available
    
   0.799
MVB12A
Multivesicular body subunit 12A.
    
 
 0.765
SMCHD1
Structural maintenance of chromosomes flexible hinge domain containing 1.
    
   0.754
GARS1
glycyl-tRNA synthetase 1.
  
  
 0.754
ENSCAPP00000007027
annotation not available
    
   0.749
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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