Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CRYBG1Crystallin beta-gamma domain containing 1. (1460 aa)    
Predicted Functional Partners:
ROS1
ROS proto-oncogene 1, receptor tyrosine kinase.
  
 
 
 0.660
ENSCAPP00000006458
annotation not available
    
 0.652
MMP11
Matrix metallopeptidase 11.
    
 0.618
ENSCAPP00000002343
annotation not available
    
  0.579
ENSCAPP00000008125
annotation not available
    
  0.579
DES
Desmin.
    
   0.566
GNAL
G protein subunit alpha L.
    
 0.555
SAR1A
Secretion associated Ras related GTPase 1A.
     
 0.541
SAR1B
Secretion associated Ras related GTPase 1B.
     
 0.541
CDK19
Cyclin dependent kinase 19.
     
 0.520
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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