STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRYBG1Crystallin beta-gamma domain containing 1. (1460 aa)    
Predicted Functional Partners:
PPP2R5C
Protein phosphatase 2 regulatory subunit B'gamma.
    
   0.843
PPP2R5D
Protein phosphatase 2 regulatory subunit B'delta.
    
   0.759
TEP1
Telomerase associated protein 1.
    
 0.668
FBXL4
F-box and leucine rich repeat protein 4.
    
 
 0.611
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.584
C1QC
Complement C1q C chain.
    
  0.581
IL17RD
Interleukin 17 receptor D.
      
 0.564
TAF1B
TATA-box binding protein associated factor, RNA polymerase I subunit B.
  
 
  0.561
TAF12
TATA-box binding protein associated factor 12.
    
  0.547
TAF9
TATA-box binding protein associated factor 9.
    
  0.546
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.