STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004251annotation not available (243 aa)    
Predicted Functional Partners:
OXSM
3-oxoacyl-ACP synthase, mitochondrial.
 
 0.996
ENSCAPP00000016271
annotation not available
  
 0.991
ACACB
acetyl-CoA carboxylase beta.
  
 
 0.958
ACACA
acetyl-CoA carboxylase alpha.
  
 
 0.958
ENSCAPP00000014738
annotation not available
    
 0.933
MRPS16
Mitochondrial ribosomal protein S16.
  
 
 0.933
CBR4
Carbonyl reductase 4.
 
 0.928
ENSCAPP00000003358
annotation not available
  
 
 0.920
ENSCAPP00000006634
annotation not available
   
   0.905
AASDHPPT
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
  
 
 0.901
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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