Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004253annotation not available (467 aa)    
Predicted Functional Partners:
ENSCAPP00000010310
annotation not available
    
 0.867
MEIG1
Meiosis/spermiogenesis associated 1.
      
 0.866
SPATA4
Spermatogenesis associated 4.
   
 0.862
DNALI1
Dynein axonemal light intermediate chain 1.
  
  
 0.858
ENSCAPP00000004666
annotation not available
  
 
 0.839
ENSCAPP00000015276
annotation not available
  
 
 0.839
GAS8
Growth arrest specific 8.
  
  
 0.821
DNAI1
Dynein axonemal intermediate chain 1.
   
  
 0.803
RSPH9
Radial spoke head component 9.
  
  
 0.795
KPNB1
Karyopherin subunit beta 1.
   
 0.793
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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