STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKAP3A-kinase anchoring protein 3. (713 aa)    
Predicted Functional Partners:
ROPN1L
Rhophilin associated tail protein 1 like.
   
 
 0.640
TNP1
Transition protein 1.
  
  
 0.625
ODF1
Outer dense fiber of sperm tails 1.
  
  
 0.613
ENSCAPP00000006373
annotation not available
   
  
 0.575
ENSCAPP00000013259
annotation not available
   
 
 0.568
ENSCAPP00000013831
annotation not available
    
 0.561
PRKAR1B
Protein kinase cAMP-dependent type I regulatory subunit beta.
    
 0.515
SPA17
Sperm autoantigenic protein 17.
    
 
 0.509
PRKAR2B
Protein kinase cAMP-dependent type II regulatory subunit beta.
    
 0.474
C12orf50
Chromosome 12 open reading frame 50.
  
    0.451
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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