Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GGT6Gamma-glutamyltransferase 6. (415 aa)    
Predicted Functional Partners:
GCLC
Glutamate-cysteine ligase catalytic subunit.
     
 0.960
GGT5
Gamma-glutamyltransferase 5.
     
 0.955
ANPEP
Alanyl aminopeptidase, membrane.
    
 0.948
GSR
Glutathione-disulfide reductase.
    
 0.947
GSS
Glutathione synthetase.
   
 
 0.945
ENSCAPP00000011223
annotation not available
     
 0.939
ENSCAPP00000004078
annotation not available
   
 
 0.935
GPX2
Glutathione peroxidase 2.
    
 0.934
ENSCAPP00000006402
annotation not available
     
 0.933
GAD1
Glutamate decarboxylase 1.
    
 0.932
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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