STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004274annotation not available (576 aa)    
Predicted Functional Partners:
C22orf23
Chromosome 22 open reading frame 23.
   
    0.673
TNC
Tenascin C.
    
  0.660
TNR
Tenascin R.
    
  0.660
TNN
Tenascin N.
    
  0.660
ENSCAPP00000007542
annotation not available
  
 
 
 0.655
DNAH5
Dynein axonemal heavy chain 5.
    
 
 0.643
DNAH11
Dynein axonemal heavy chain 11.
    
 
 0.628
RSPH9
Radial spoke head component 9.
   
 0.619
SPAG1
Sperm associated antigen 1.
   
 0.607
DNAH9
Dynein axonemal heavy chain 9.
    
 
 0.606
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.