ENSCAPP00000004275 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000004275

annotation not available (173 aa)

Predicted Functional Partners:

IFNLR1

0.984

IL10RB

0.928

TP53BP2

0.926

ENSCAPP00000009742

0.899

JAK1

0.887

TYK2

0.863

ENSCAPP00000001226

0.735

ENSCAPP00000001420

0.735

ENSCAPP00000012450

0.735

ENSCAPP00000004632

0.690

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000001226	ENSCAPP00000004275	ENSCAPP00000001226	ENSCAPP00000004275	annotation not available	annotation not available	0.735
ENSCAPP00000001226	ENSCAPP00000004632	ENSCAPP00000001226	ENSCAPP00000004632	annotation not available	annotation not available	0.629
ENSCAPP00000001226	ENSCAPP00000009742	ENSCAPP00000001226	ENSCAPP00000009742	annotation not available	annotation not available	0.869
ENSCAPP00000001226	IFNLR1	ENSCAPP00000001226	ENSCAPP00000001956	annotation not available	Interferon lambda receptor 1.	0.862
ENSCAPP00000001226	IL10RB	ENSCAPP00000001226	ENSCAPP00000015489	annotation not available	Interleukin 10 receptor subunit beta.	0.788
ENSCAPP00000001226	JAK1	ENSCAPP00000001226	ENSCAPP00000001424	annotation not available	Janus kinase 1.	0.860
ENSCAPP00000001226	TP53BP2	ENSCAPP00000001226	ENSCAPP00000015985	annotation not available	Tumor protein p53 binding protein 2.	0.788
ENSCAPP00000001226	TYK2	ENSCAPP00000001226	ENSCAPP00000003485	annotation not available	Tyrosine kinase 2.	0.865
ENSCAPP00000001420	ENSCAPP00000004275	ENSCAPP00000001420	ENSCAPP00000004275	annotation not available	annotation not available	0.735
ENSCAPP00000001420	ENSCAPP00000004632	ENSCAPP00000001420	ENSCAPP00000004632	annotation not available	annotation not available	0.629
ENSCAPP00000001420	ENSCAPP00000009742	ENSCAPP00000001420	ENSCAPP00000009742	annotation not available	annotation not available	0.869
ENSCAPP00000001420	IFNLR1	ENSCAPP00000001420	ENSCAPP00000001956	annotation not available	Interferon lambda receptor 1.	0.862
ENSCAPP00000001420	IL10RB	ENSCAPP00000001420	ENSCAPP00000015489	annotation not available	Interleukin 10 receptor subunit beta.	0.788
ENSCAPP00000001420	JAK1	ENSCAPP00000001420	ENSCAPP00000001424	annotation not available	Janus kinase 1.	0.860
ENSCAPP00000001420	TP53BP2	ENSCAPP00000001420	ENSCAPP00000015985	annotation not available	Tumor protein p53 binding protein 2.	0.788
ENSCAPP00000001420	TYK2	ENSCAPP00000001420	ENSCAPP00000003485	annotation not available	Tyrosine kinase 2.	0.865
ENSCAPP00000004275	ENSCAPP00000001226	ENSCAPP00000004275	ENSCAPP00000001226	annotation not available	annotation not available	0.735
ENSCAPP00000004275	ENSCAPP00000001420	ENSCAPP00000004275	ENSCAPP00000001420	annotation not available	annotation not available	0.735
ENSCAPP00000004275	ENSCAPP00000004632	ENSCAPP00000004275	ENSCAPP00000004632	annotation not available	annotation not available	0.690
ENSCAPP00000004275	ENSCAPP00000009742	ENSCAPP00000004275	ENSCAPP00000009742	annotation not available	annotation not available	0.899