STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004281annotation not available (136 aa)    
Predicted Functional Partners:
TRERF1
Transcriptional regulating factor 1.
      
 0.846
TAF8
TATA-box binding protein associated factor 8.
      
 0.751
INSYN2B
Inhibitory synaptic factor family member 2B.
    
 0.592
ISG20L2
Interferon stimulated exonuclease gene 20 like 2.
      
 0.537
ENSCAPP00000002517
annotation not available
    
  0.518
ENSCAPP00000010915
annotation not available
    
  0.518
ZNF541
Zinc finger protein 541.
      
 0.495
C12orf75
Chromosome 12 open reading frame 75.
      
 0.492
PLA2G4A
Phospholipase A2 group IVA.
     
  0.482
TAF9
TATA-box binding protein associated factor 9.
    
 0.479
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.