STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004283annotation not available (153 aa)    
Predicted Functional Partners:
CCDC14
Coiled-coil domain containing 14.
   
   0.913
LETM1
Leucine zipper and EF-hand containing transmembrane protein 1.
    
   0.898
C18orf54
Chromosome 18 open reading frame 54.
      
 0.827
ENSCAPP00000015257
annotation not available
   
  
 0.776
DEPDC1B
DEP domain containing 1B.
   
 
 0.760
RIBC2
RIB43A domain with coiled-coils 2.
      
 0.754
ZNF367
Zinc finger protein 367.
      
 0.729
GSTCD
Glutathione S-transferase C-terminal domain containing.
      
 0.722
CEP85
Centrosomal protein 85.
   
  
 0.698
C3orf14
Chromosome 3 open reading frame 14.
      
 0.690
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.