STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF166Ring finger protein 166. (204 aa)    
Predicted Functional Partners:
UBE2L6
Ubiquitin conjugating enzyme E2 L6.
    
 0.628
KLHL28
Kelch like family member 28.
    
 
 0.626
ZBTB39
Zinc finger and BTB domain containing 39.
    
 0.608
ZNF653
Zinc finger protein 653.
    
 0.595
ENSCAPP00000010067
annotation not available
    
 0.588
ENSCAPP00000013486
annotation not available
    
 0.580
MED13L
Mediator complex subunit 13L.
     
 0.565
ICOS
Inducible T cell costimulator.
    
  0.560
ENSCAPP00000001227
annotation not available
      
 0.558
ENSCAPP00000000492
annotation not available
    
  0.556
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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