STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF166Ring finger protein 166. (204 aa)    
Predicted Functional Partners:
RNF114
Ring finger protein 114.
    
   0.915
TNKS
Tankyrase.
    
  0.785
KLHL28
Kelch like family member 28.
    
 
 0.760
ZC3HC1
Zinc finger C3HC-type containing 1.
    
 
 0.750
ZNF653
Zinc finger protein 653.
    
 0.715
AMOTL1
Angiomotin like 1.
    
 0.691
ZBTB39
Zinc finger and BTB domain containing 39.
    
 0.691
CHD1L
Chromodomain helicase DNA binding protein 1 like.
    
   0.684
CARM1
Coactivator associated arginine methyltransferase 1.
    
 
 0.659
ENSCAPP00000013486
annotation not available
    
 0.652
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.