STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004300annotation not available (193 aa)    
Predicted Functional Partners:
RRP7A
Ribosomal RNA processing 7 homolog A.
    
 0.975
NOL6
Nucleolar protein 6.
   
 0.971
WDR36
WD repeat domain 36.
   
 0.969
ENSCAPP00000001305
annotation not available
    
  0.961
KRR1
KRR1 small subunit processome component homolog.
   
  0.961
RRP36
Ribosomal RNA processing 36.
    
  0.960
NOC4L
Nucleolar complex associated 4 homolog.
    
  0.960
UTP11
UTP11 small subunit processome component.
    
  0.960
IMP4
IMP U3 small nucleolar ribonucleoprotein 4.
    
  0.960
WDR46
WD repeat domain 46.
    
  0.960
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.