STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MICAL1Microtubule associated monooxygenase, calponin and LIM domain containing 1. (1027 aa)    
Predicted Functional Partners:
RAB10
RAB10, member RAS oncogene family.
   
 
 0.887
PLXNA1
Plexin A1.
    
 
 0.671
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 
 0.644
RAB8A
RAB8A, member RAS oncogene family.
   
 
 0.630
ENSCAPP00000005688
annotation not available
   
 
 0.591
PLXNA4
Plexin A4.
    
 
 0.582
RAB8B
RAB8B, member RAS oncogene family.
   
 
 0.573
STK4
Serine/threonine kinase 4.
    
  0.557
STK3
Serine/threonine kinase 3.
    
  0.557
RAB15
RAB15, member RAS oncogene family.
   
 
 0.549
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.