Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ME1Malic enzyme 1. (479 aa)    
Predicted Functional Partners:
PC
Pyruvate carboxylase.
   
 0.982
ENSCAPP00000001229
annotation not available
  
 0.973
ENSCAPP00000010425
annotation not available
  
 0.967
ENSCAPP00000003461
annotation not available
  
 0.963
LDHA
Lactate dehydrogenase A.
  
 0.962
MDH1
Malate dehydrogenase 1.
  
 0.961
FH
Fumarate hydratase.
  
 
 0.960
MDH2
Malate dehydrogenase 2.
  
 0.951
CS
Citrate synthase.
  
 
 0.947
PKM
Pyruvate kinase M1/2.
  
 0.943
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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