STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004313annotation not available (138 aa)    
Predicted Functional Partners:
ENSCAPP00000002614
annotation not available
   
 0.987
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.987
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.963
BIRC6
Baculoviral IAP repeat containing 6.
   
 0.830
STUB1
STIP1 homology and U-box containing protein 1.
    
 0.817
BARD1
BRCA1 associated RING domain 1.
    
 0.808
RBX1
Ring-box 1.
    
 0.803
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.775
ENSCAPP00000010366
annotation not available
   
 0.775
RANBP2
RAN binding protein 2.
    
 0.770
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.