Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004313annotation not available (138 aa)    
Predicted Functional Partners:
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.945
ENSCAPP00000002614
annotation not available
   
 0.936
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.936
BIRC7
Baculoviral IAP repeat containing 7.
   
 0.904
RNF38
Ring finger protein 38.
    
 0.869
UBE2D4
Ubiquitin conjugating enzyme E2 D4 (putative).
     
  0.852
STUB1
STIP1 homology and U-box containing protein 1.
    
 0.829
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.827
ENSCAPP00000010366
annotation not available
   
 0.827
ENSCAPP00000000972
annotation not available
    
   0.817
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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