close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004315annotation not available (387 aa)    
Predicted Functional Partners:
SF3B1
Splicing factor 3b subunit 1.
   
 0.983
SF3A1
Splicing factor 3a subunit 1.
   
  0.982
ENSCAPP00000001161
annotation not available
    
  0.979
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
    
 0.978
ENSCAPP00000009270
annotation not available
   
 0.975
MFAP1
Microfibril associated protein 1.
   
 0.974
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
   
  0.972
ZMAT2
Zinc finger matrin-type 2.
    
  0.958
ENSCAPP00000001654
annotation not available
    
 0.956
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
  0.954
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.