STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC62SEC62 homolog, preprotein translocation factor. (358 aa)    
Predicted Functional Partners:
SEC63
SEC63 homolog, protein translocation regulator.
   
 0.999
STK39
Serine/threonine kinase 39.
    
 0.997
SEC61B
SEC61 translocon beta subunit.
    
 0.989
SEC61A1
SEC61 translocon alpha 1 subunit.
   
 0.974
SEC61A2
SEC61 translocon alpha 2 subunit.
   
 0.974
STRADA
STE20 related adaptor alpha.
    
 0.951
STRADB
STE20 related adaptor beta.
    
 0.951
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
     
 0.908
HFM1
Helicase for meiosis 1.
     
 0.728
ASCC3
Activating signal cointegrator 1 complex subunit 3.
     
 0.728
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.