Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AMZ1Archaelysin family metallopeptidase 1. (498 aa)    
Predicted Functional Partners:
CYFIP1
Cytoplasmic FMR1 interacting protein 1.
    
   0.890
NCKAP1
NCK associated protein 1.
    
   0.704
WASF2
WASP family member 2.
    
   0.695
WASF1
WASP family member 1.
    
   0.691
CCDC57
Coiled-coil domain containing 57.
      
 0.552
DNAJC12
DnaJ heat shock protein family (Hsp40) member C12.
      
 0.551
CCDC71
Coiled-coil domain containing 71.
      
 0.545
ENSCAPP00000010299
annotation not available
   
  
 0.539
FASTKD3
FAST kinase domains 3.
      
 0.534
WASF3
WASP family member 3.
    
   0.527
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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