Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PRR15LProline rich 15 like. (100 aa)    
Predicted Functional Partners:
COPG1
Coatomer protein complex subunit gamma 1.
   
 0.972
ARCN1
Archain 1.
   
 0.972
COPB1
Coatomer protein complex subunit beta 1.
   
 0.968
COPE
Coatomer protein complex subunit epsilon.
   
 0.968
COPB2
Coatomer protein complex subunit beta 2.
   
 0.968
COPA
Coatomer protein complex subunit alpha.
   
 0.967
OSBPL7
Oxysterol binding protein like 7.
      
 0.748
PAFAH1B1
Platelet activating factor acetylhydrolase 1b regulatory subunit 1.
     
  0.717
ENSCAPP00000010954
annotation not available
     
  0.717
SCYL3
SCY1 like pseudokinase 3.
    
  0.686
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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