Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARID3AAT-rich interaction domain 3A. (603 aa)    
Predicted Functional Partners:
ARID3B
AT-rich interaction domain 3B.
   
   0.960
ENSCAPP00000010050
annotation not available
    
 
 0.850
PBRM1
Polybromo 1.
   
 0.746
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.732
ACTL6A
Actin like 6A.
    
 0.732
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 0.723
TP53
Tumor protein p53.
    
 0.713
ENSCAPP00000006586
annotation not available
   
 0.693
POU5F2
POU domain class 5, transcription factor 2.
    
 
 0.684
ENSCAPP00000010002
annotation not available
    
 
 0.684
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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