Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
KCTD15Potassium channel tetramerization domain containing 15. (283 aa)    
Predicted Functional Partners:
TFAP2C
Transcription factor AP-2 gamma.
    
 0.838
TFAP2E
Transcription factor AP-2 epsilon.
    
 0.819
TFAP2D
Transcription factor AP-2 delta.
    
 0.808
COQ6
Coenzyme Q6, monooxygenase.
   
  
 0.580
PCDH19
Protocadherin 19.
      
 0.571
TMEM230
Transmembrane protein 230.
    
   0.565
KCTD20
Potassium channel tetramerization domain containing 20.
      
 0.563
KCTD21
Potassium channel tetramerization domain containing 21.
    
 
 0.559
KCTD11
Potassium channel tetramerization domain containing 11.
    
 
 0.558
CGGBP1
CGG triplet repeat binding protein 1.
     
 0.558
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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