STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004357annotation not available (205 aa)    
Predicted Functional Partners:
ENSCAPP00000000808
annotation not available
 
      0.900
KCMF1
Potassium channel modulatory factor 1.
    
 
 0.867
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.608
EMC1
ER membrane protein complex subunit 1.
 
    
 0.573
UBA5
Ubiquitin like modifier activating enzyme 5.
     
 0.520
ATG7
Autophagy related 7.
     
 0.520
CALML3
Calmodulin like 3.
    
 
 0.514
DYNC1H1
Dynein cytoplasmic 1 heavy chain 1.
   
  
 0.512
ENSCAPP00000017763
annotation not available
    
 
 0.496
BIRC6
Baculoviral IAP repeat containing 6.
   
 
 0.473
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.