Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC29A2Solute carrier family 29 member 2. (437 aa)    
Predicted Functional Partners:
SLC29A3
Solute carrier family 29 member 3.
     
 0.912
ENSCAPP00000013374
annotation not available
     
  0.911
TBRG1
Transforming growth factor beta regulator 1.
      
 0.762
MFSD9
Major facilitator superfamily domain containing 9.
      
 0.726
SLCO3A1
Solute carrier organic anion transporter family member 3A1.
      
 0.673
COPS2
COP9 signalosome subunit 2.
      
 0.643
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
      
 0.635
SLC28A1
Solute carrier family 28 member 1.
      
 0.619
ADGRL4
Adhesion G protein-coupled receptor L4.
    
   0.615
ENSCAPP00000015750
annotation not available
      
 0.605
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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