STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004359annotation not available (73 aa)    
Predicted Functional Partners:
KCNQ4
Potassium voltage-gated channel subfamily Q member 4.
      
 0.568
CLIC5
Chloride intracellular channel 5.
      
 0.568
USH2A
Usherin.
      
 0.566
PCDH15
Protocadherin related 15.
      
 0.565
OTOF
Otoferlin.
      
 0.564
WFS1
Wolframin ER transmembrane glycoprotein.
      
 0.564
SLC17A8
Solute carrier family 17 member 8.
      
 0.563
TMC1
Transmembrane channel like 1.
      
 0.556
SLC26A5
Solute carrier family 26 member 5.
      
 0.555
MYO6
Myosin VI.
      
 0.549
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.