Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCNN1Potassium calcium-activated channel subfamily N member 1. (522 aa)    
Predicted Functional Partners:
KCNMA1
Potassium calcium-activated channel subfamily M alpha 1.
   
 
 0.989
KCNN2
Potassium calcium-activated channel subfamily N member 2.
   
 
  0.969
KCNN4
Potassium calcium-activated channel subfamily N member 4.
     
 0.961
ENSCAPP00000000815
annotation not available
   
 
 0.949
KCNN3
Potassium calcium-activated channel subfamily N member 3.
   
 
  0.947
KCNMB1
Potassium calcium-activated channel subfamily M regulatory beta subunit 1.
     
 0.929
ENSCAPP00000003984
annotation not available
     
 0.928
PRKCG
Protein kinase C gamma.
   
 
 0.919
PRKCA
Protein kinase C alpha.
   
 
 0.867
PRKCB
Protein kinase C beta.
   
 
 0.867
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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