STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000004380annotation not available (2003 aa)    
Predicted Functional Partners:
ITGA6
Integrin subunit alpha 6.
    
 0.865
ITGAV
Integrin subunit alpha V.
    
 0.851
ENSCAPP00000016185
annotation not available
    
 0.851
ITGA2B
Integrin subunit alpha 2b.
    
 0.840
ITGA5
Integrin subunit alpha 5.
    
 0.838
ITGB6
Integrin subunit beta 6.
    
 0.835
ITGB8
Integrin subunit beta 8.
    
 0.829
ITGB4
Integrin subunit beta 4.
    
 0.827
ITGB5
Integrin subunit beta 5.
    
 0.825
ITGA8
Integrin subunit alpha 8.
    
 0.822
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.