LRMP protein (Cavia aperea) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

LRMP

Lymphoid restricted membrane protein. (432 aa)

Predicted Functional Partners:

SYNE3

0.698

SUN3

0.656

SUN5

0.645

ENSCAPP00000015020

0.626

SUN1

0.624

PRKG1

0.622

ENSCAPP00000007529

0.622

ENSCAPP00000015390

0.615

SUN2

0.569

ITPR2

0.568

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000007529	ITPR2	ENSCAPP00000007529	ENSCAPP00000005655	annotation not available	Inositol 1,4,5-trisphosphate receptor type 2.	0.583
ENSCAPP00000007529	LRMP	ENSCAPP00000007529	ENSCAPP00000004383	annotation not available	Lymphoid restricted membrane protein.	0.622
ENSCAPP00000015020	ENSCAPP00000015390	ENSCAPP00000015020	ENSCAPP00000015390	annotation not available	annotation not available	0.761
ENSCAPP00000015020	LRMP	ENSCAPP00000015020	ENSCAPP00000004383	annotation not available	Lymphoid restricted membrane protein.	0.626
ENSCAPP00000015020	SUN1	ENSCAPP00000015020	ENSCAPP00000011315	annotation not available	Sad1 and UNC84 domain containing 1.	0.947
ENSCAPP00000015020	SUN2	ENSCAPP00000015020	ENSCAPP00000003867	annotation not available	Sad1 and UNC84 domain containing 2.	0.947
ENSCAPP00000015020	SUN3	ENSCAPP00000015020	ENSCAPP00000007541	annotation not available	Sad1 and UNC84 domain containing 3.	0.947
ENSCAPP00000015020	SUN5	ENSCAPP00000015020	ENSCAPP00000015129	annotation not available	Sad1 and UNC84 domain containing 5.	0.761
ENSCAPP00000015020	SYNE3	ENSCAPP00000015020	ENSCAPP00000007051	annotation not available	Spectrin repeat containing nuclear envelope family member 3.	0.927
ENSCAPP00000015390	ENSCAPP00000015020	ENSCAPP00000015390	ENSCAPP00000015020	annotation not available	annotation not available	0.761
ENSCAPP00000015390	LRMP	ENSCAPP00000015390	ENSCAPP00000004383	annotation not available	Lymphoid restricted membrane protein.	0.615
ENSCAPP00000015390	SUN1	ENSCAPP00000015390	ENSCAPP00000011315	annotation not available	Sad1 and UNC84 domain containing 1.	0.733
ENSCAPP00000015390	SUN2	ENSCAPP00000015390	ENSCAPP00000003867	annotation not available	Sad1 and UNC84 domain containing 2.	0.712
ENSCAPP00000015390	SUN3	ENSCAPP00000015390	ENSCAPP00000007541	annotation not available	Sad1 and UNC84 domain containing 3.	0.791
ENSCAPP00000015390	SUN5	ENSCAPP00000015390	ENSCAPP00000015129	annotation not available	Sad1 and UNC84 domain containing 5.	0.681
ENSCAPP00000015390	SYNE3	ENSCAPP00000015390	ENSCAPP00000007051	annotation not available	Spectrin repeat containing nuclear envelope family member 3.	0.847
ITPR2	ENSCAPP00000007529	ENSCAPP00000005655	ENSCAPP00000007529	Inositol 1,4,5-trisphosphate receptor type 2.	annotation not available	0.583
ITPR2	LRMP	ENSCAPP00000005655	ENSCAPP00000004383	Inositol 1,4,5-trisphosphate receptor type 2.	Lymphoid restricted membrane protein.	0.568
ITPR2	PRKG1	ENSCAPP00000005655	ENSCAPP00000006825	Inositol 1,4,5-trisphosphate receptor type 2.	Protein kinase cGMP-dependent 1.	0.728
LRMP	ENSCAPP00000007529	ENSCAPP00000004383	ENSCAPP00000007529	Lymphoid restricted membrane protein.	annotation not available	0.622