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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM126AFamily with sequence similarity 126 member A. (422 aa)    
Predicted Functional Partners:
TTC7B
Tetratricopeptide repeat domain 7B.
    
 
 0.950
PI4KA
Phosphatidylinositol 4-kinase alpha.
    
 
 0.921
TTC7A
Tetratricopeptide repeat domain 7A.
    
 
 0.830
AIMP1
Aminoacyl tRNA synthetase complex interacting multifunctional protein 1.
      
 0.548
TMEM150A
Transmembrane protein 150A.
      
 0.544
TMEM109
Transmembrane protein 109.
      
 0.544
ZCCHC24
Zinc finger CCHC-type containing 24.
      
 0.541
LYPD6
LY6/PLAUR domain containing 6.
      
 0.538
ENSCAPP00000005824
annotation not available
      
 0.523
ENSCAPP00000012517
annotation not available
    
   0.476
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.