ENSCAPP00000004396 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000004396

annotation not available (219 aa)

Predicted Functional Partners:

ITSN2

0.979

BARD1

0.973

NECTIN2

0.969

ENSCAPP00000000576

0.940

ENSCAPP00000004781

0.940

ITGAL

0.921

ENSCAPP00000001262

0.907

RAG2

0.882

ENSCAPP00000002614

0.856

UBE2V1

0.856

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BARD1	ENSCAPP00000000576	ENSCAPP00000016499	ENSCAPP00000000576	BRCA1 associated RING domain 1.	annotation not available	0.794
BARD1	ENSCAPP00000001262	ENSCAPP00000016499	ENSCAPP00000001262	BRCA1 associated RING domain 1.	annotation not available	0.562
BARD1	ENSCAPP00000002614	ENSCAPP00000016499	ENSCAPP00000002614	BRCA1 associated RING domain 1.	annotation not available	0.686
BARD1	ENSCAPP00000004396	ENSCAPP00000016499	ENSCAPP00000004396	BRCA1 associated RING domain 1.	annotation not available	0.973
BARD1	ENSCAPP00000004781	ENSCAPP00000016499	ENSCAPP00000004781	BRCA1 associated RING domain 1.	annotation not available	0.794
BARD1	RAG2	ENSCAPP00000016499	ENSCAPP00000004867	BRCA1 associated RING domain 1.	Recombination activating 2.	0.551
BARD1	UBE2V1	ENSCAPP00000016499	ENSCAPP00000018269	BRCA1 associated RING domain 1.	Ubiquitin conjugating enzyme E2 V1.	0.686
ENSCAPP00000000576	BARD1	ENSCAPP00000000576	ENSCAPP00000016499	annotation not available	BRCA1 associated RING domain 1.	0.794
ENSCAPP00000000576	ENSCAPP00000002614	ENSCAPP00000000576	ENSCAPP00000002614	annotation not available	annotation not available	0.969
ENSCAPP00000000576	ENSCAPP00000004396	ENSCAPP00000000576	ENSCAPP00000004396	annotation not available	annotation not available	0.940
ENSCAPP00000000576	ENSCAPP00000004781	ENSCAPP00000000576	ENSCAPP00000004781	annotation not available	annotation not available	0.999
ENSCAPP00000000576	ITSN2	ENSCAPP00000000576	ENSCAPP00000009309	annotation not available	Intersectin 2.	0.694
ENSCAPP00000000576	UBE2V1	ENSCAPP00000000576	ENSCAPP00000018269	annotation not available	Ubiquitin conjugating enzyme E2 V1.	0.969
ENSCAPP00000001262	BARD1	ENSCAPP00000001262	ENSCAPP00000016499	annotation not available	BRCA1 associated RING domain 1.	0.562
ENSCAPP00000001262	ENSCAPP00000004396	ENSCAPP00000001262	ENSCAPP00000004396	annotation not available	annotation not available	0.907
ENSCAPP00000002614	BARD1	ENSCAPP00000002614	ENSCAPP00000016499	annotation not available	BRCA1 associated RING domain 1.	0.686
ENSCAPP00000002614	ENSCAPP00000000576	ENSCAPP00000002614	ENSCAPP00000000576	annotation not available	annotation not available	0.969
ENSCAPP00000002614	ENSCAPP00000004396	ENSCAPP00000002614	ENSCAPP00000004396	annotation not available	annotation not available	0.856
ENSCAPP00000002614	ENSCAPP00000004781	ENSCAPP00000002614	ENSCAPP00000004781	annotation not available	annotation not available	0.969
ENSCAPP00000002614	UBE2V1	ENSCAPP00000002614	ENSCAPP00000018269	annotation not available	Ubiquitin conjugating enzyme E2 V1.	0.990